STRINGSTRING
avrBs1 protein (Xanthomonas campestris campestris) - STRING interaction network
"avrBs1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
avrBs1annotation not available (445 aa)    
Predicted Functional Partners:
hopD
Uncharacterized protein AvrBs1.1; Protein tyrosine phosphatase (356 aa)
         
  0.828
avrBs2
Avirulence protein; Glycerophosphoryl diester phosphodiesterase,probable (718 aa)
           
  0.704
avrXccC
Avirulence protein; Glucan-binding domain (YG repeat) (440 aa)
           
  0.609
hrpG
HrpG protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (262 aa)
           
  0.584
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
           
  0.489
hrcN
HrpB6 protein; Flagellar biosynthesis/type III secretory pathway ATPase (438 aa)
           
  0.487
hpaB
HpaB protein; Pathogenicity-related export of effector proteins to host plants (160 aa)
           
  0.485
hrcU
HrcU protein; Type III secretion exporter (357 aa)
           
  0.432
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]