STRINGSTRING
CAP51772.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51772.1" - Topoisomerase IA in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51772.1Topoisomerase IA (670 aa)    
Predicted Functional Partners:
CAP51771.1
Single-stranded DNA-binding protein (146 aa)
 
 
  0.911
CAP51770.1
annotation not available (177 aa)
 
     
  0.864
CAP51769.1
annotation not available (251 aa)
 
   
  0.819
CAP51793.1
Superfamily II DNA/RNA helicases, SNF2 family (759 aa)
 
 
  0.815
CAP51766.1
annotation not available (547 aa)
 
   
  0.802
recQ
Superfamily II DNA helicase (600 aa)
 
 
  0.800
CAP51768.1
annotation not available (408 aa)
 
        0.789
CAP51767.1
annotation not available (186 aa)
 
        0.777
CAP51808.1
annotation not available (229 aa)
   
        0.754
CAP51824.1
annotation not available (642 aa)
 
     
  0.754
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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