STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51778.1annotation not available (288 aa)    
Predicted Functional Partners:
CAP51777.1
Uncharacterized protein conserved in bacteria
 
   
 0.976
CAP51774.1
annotation not available
 
   
 0.945
CAP51776.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
 
     0.943
CAP51775.1
annotation not available
     
 0.769
CAP53074.1
annotation not available
  
     0.743
XCC0357
Uncharacterized protein conserved in bacteria
  
     0.574
XCC3209
Outer membrane receptor proteins mostly Fe transport
  
    0.557
XCC0647
Uncharacterized protein; Predicted ATPases
  
     0.547
XCC2399
annotation not available
  
    0.543
pilW
Conserved hypothetical protein; Tfp pilus assembly protein PilW
  
     0.516
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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