STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51791.1annotation not available (106 aa)    
Predicted Functional Partners:
CAP51790.1
annotation not available
 
     0.932
CAP51789.1
annotation not available
 
     0.899
CAP51793.1
Superfamily II DNA/RNA helicases, SNF2 family
 
     0.853
CAP51787.1
annotation not available
 
     0.852
CAP51788.1
annotation not available
 
     0.836
CAP51786.1
annotation not available
 
     0.834
CAP51798.1
annotation not available
  
     0.783
CAP51765.1
annotation not available
  
     0.782
CAP51804.1
annotation not available
  
     0.782
CAP51813.1
annotation not available
  
     0.782
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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