STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51796.1Chromosome segregation ATPases (595 aa)    
Predicted Functional Partners:
pcrA
Superfamily I DNA and RNA helicases
 
   
 0.976
CAP51798.1
annotation not available
 
     0.830
CAP51803.1
annotation not available
 
     0.765
XCC0525
ATP-dependent DNA helicase; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
  
    0.764
CAP51797.1
annotation not available
 
     0.727
hsdR
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification
  
    0.682
CAP52642.1
Type I site-specific restriction-modification system R (restriction) subunit and related helicases
  
    0.682
CAP51801.1
annotation not available
 
     0.681
CAP51799.1
annotation not available
 
     0.659
CAP51802.1
annotation not available
 
     0.650
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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