STRINGSTRING
CAP51815.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51815.1" - DNA repair proteins in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51815.1DNA repair proteins (164 aa)    
Predicted Functional Partners:
CAP51814.1
annotation not available (54 aa)
              0.845
CAP51813.1
annotation not available (254 aa)
 
          0.778
CAP51812.1
annotation not available (954 aa)
 
     
  0.766
CAP51809.1
annotation not available (308 aa)
 
          0.761
CAP51810.1
annotation not available (476 aa)
 
     
  0.761
CAP51811.1
annotation not available (147 aa)
 
          0.760
CAP51808.1
annotation not available (229 aa)
 
          0.760
CAP51807.1
annotation not available (136 aa)
 
          0.756
CAP51806.1
annotation not available (105 aa)
 
          0.745
smf
DNA processing chain A; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake (378 aa)
   
   
  0.663
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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