STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51820.1annotation not available (506 aa)    
Predicted Functional Partners:
CAP51817.1
Unknown
 
    0.977
CAP51818.1
annotation not available
 
     0.970
CAP51819.1
annotation not available
 
     0.970
CAP51816.1
annotation not available
 
     0.968
CAP51808.1
annotation not available
 
    0.936
CAP51809.1
annotation not available
 
    0.936
CAP51766.1
annotation not available
 
    0.933
CAP51811.1
annotation not available
 
     0.910
CAP51812.1
annotation not available
 
     0.910
CAP51810.1
annotation not available
 
     0.909
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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