STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1790annotation not available (156 aa)    
Predicted Functional Partners:
XCC1789
Uncharacterized protein; SAM-dependent methyltransferases
 
     0.920
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily
       0.898
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation
       0.898
XCC1786
Integral membrane protein; Permeases of the drug/metabolite transporter (DMT) superfamily
       0.898
XCC2843
Uncharacterized protein
  
     0.608
XCC1791
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family
       0.605
XCC2390
annotation not available
  
     0.597
XCC3383
annotation not available
  
     0.582
XCC1424
annotation not available
  
     0.546
ygeA
Putative resistance protein; Unnamed protein product; Belongs to the aspartate/glutamate racemases family
       0.543
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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