STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcPMFS transporter; Permeases of the major facilitator superfamily; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (481 aa)    
Predicted Functional Partners:
aglA2
Alpha-xylosidase; Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family
 
   
 0.784
xylP
Transport protein; Na+/melibiose symporter and related transporters
 
   
 0.755
xylA1
Xylose isomerase; Belongs to the xylose isomerase family
 
   
 0.720
xylB1
Glycerol kinase
 
   
 0.688
pheC
Cyclohexadienyl dehydratase; ABC-type amino acid transport/signal transduction systems periplasmic component/domain
   
  
 0.603
xylR
Xylose repressor-like protein; Transcriptional regulator/sugar kinase
     
 0.599
XCC1756
Uncharacterized protein
       0.554
XCC4077
Cellobionic acid phosphorylase; Catalyzes the reversible phosphorolysis of cellobionic acid (4-O-beta-D-glucopyranosyl-D-gluconate), a probable step in cellulose degradation. May be part of a metabolic pathway where cellobionic acid is converted into alpha-D-glucose 1-phosphate and D-gluconic acid to enter glycolysis and the pentose phosphate pathway, respectively. Produces 4-O-beta-D-glucopyranosyl-D- glucuronate from alpha-D-glucose 1-phosphate and D-glucuronate with low activity in the synthetic direction
      
 0.501
alkB
Alkylated DNA repair protein
      
 0.482
CAP51862.1
Signal transduction kinase
     
 0.449
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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