STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1752Cellulase; Uncharacterized protein related to plant photosystem II stability/assembly factor (751 aa)    
Predicted Functional Partners:
manA
Mannan endo-1,4-beta-mannosidase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family
  
     0.766
galA1
Arabinogalactan endo-14-beta-galactosidase
  
     0.711
cel2
Glucanase; Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6
  
     0.699
XCC1750
Outer membrane receptor for monomeric catechols
 
    0.688
xynA3
Beta-xylanase; Beta-1,4-xylanase
  
     0.676
XCC1754
Uncharacterized protein; Beta-galactosidase
 
   
 0.673
galA2
Arabinogalactan endo-1,4-beta-galactosidase
  
     0.668
cel1
Glucanase; Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6
  
     0.662
engXCA
Major extracellular endoglucanase; Endoglucanase
 
   
 0.647
XCC2387
Endoglucanase; Degradation of cellulose-like polysaccharides
  
     0.644
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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