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gbpR protein (Xanthomonas campestris campestris) - STRING interaction network
"gbpR" - Galactose-binding protein regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gbpRGalactose-binding protein regulator; Transcriptional regulator (345 aa)    
Predicted Functional Partners:
dgoK
2-keto-3-deoxy-galactonokinase (292 aa)
 
          0.541
XCC1745
Regucalcin; Gluconolactonase (303 aa)
 
          0.538
trpI
Transcriptional regulator (298 aa)
   
        0.444
XCC0043
Transcriptional regulator (296 aa)
   
          0.438
XCC1749
Outer membrane receptor proteins mostly Fe transport (970 aa)
              0.435
XCC3040
Transcriptional activator ampR family; Transcriptional regulator (364 aa)
   
          0.421
dgoA
4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase (223 aa)
              0.420
XCC4179
annotation not available (371 aa)
   
          0.409
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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