STRINGSTRING
XCC1742 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1742" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1742annotation not available (172 aa)    
Predicted Functional Partners:
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (293 aa)
   
 
  0.869
dapA1
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (302 aa)
   
        0.841
oma
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (818 aa)
   
 
  0.819
XCC3899
annotation not available (120 aa)
   
          0.784
XCC0013
Uncharacterized protein (89 aa)
   
          0.783
XCC2250
annotation not available (196 aa)
   
          0.782
XCC2656
annotation not available (60 aa)
   
          0.782
XCC1009
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family (618 aa)
   
 
      0.781
XCC3763
annotation not available (179 aa)
   
          0.781
XCC0936
annotation not available (215 aa)
   
          0.781
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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