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csrA protein (Xanthomonas campestris campestris) - STRING interaction network
"csrA" - Translational regulator CsrA in Xanthomonas campestris campestris
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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csrATranslational regulator CsrA; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5’- UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5’-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s) (70 aa)    
Predicted Functional Partners:
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (92 aa)
     
 
  0.889
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (436 aa)
           
  0.878
gacA
Transcriptional regulator luxR/uhpA family; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (215 aa)
   
     
  0.862
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (262 aa)
         
  0.821
fliC
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (399 aa)
 
 
 
  0.802
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (623 aa)
       
 
  0.699
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (882 aa)
              0.685
thrA
Bifunctional aspartokinase/homoserine dehydrogenase I; Aspartokinases (835 aa)
       
  0.682
pilL
Chemotaxis protein histidine kinase and related kinases (2332 aa)
     
 
  0.679
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (528 aa)
         
  0.675
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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