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tlyC protein (Xanthomonas campestris campestris) - STRING interaction network
"tlyC" - Hemolysins and related proteins containing CBS domains in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlyCHemolysins and related proteins containing CBS domains (436 aa)    
Predicted Functional Partners:
exoD
ExoD protein; Uncharacterized ABC-type transport system permease components (224 aa)
              0.898
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
   
   
  0.821
pitA
Phosphate/sulphate permeases (375 aa)
 
 
 
  0.607
fumB
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (583 aa)
   
        0.540
XCC1690
Uncharacterized protein; Phosphate transport regulator (distant homolog of PhoU) (208 aa)
              0.481
lig1
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (833 aa)
 
   
  0.419
kdsD
Arabinose 5-phosphate isomerase; Predicted sugar phosphate isomerase involved in capsule formation (333 aa)
         
  0.409
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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