STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1686Uncharacterized protein; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases (333 aa)    
Predicted Functional Partners:
XCC1687
Uncharacterized stress protein (general stress protein 26)
     0.931
sflA
NADH-dependent FMN reductase; Predicted flavoprotein
  
 
 0.608
XCC1433
Predicted flavoprotein
  
 
 0.608
XCC0006
Uncharacterized protein; Zn-dependent protease with chaperone function
   
    0.580
slt
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
   
    0.555
yrbD
Toluene tolerance protein; ABC-type transport system involved in resistance to organic solvents periplasmic component
  
    0.519
tptC
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component
   
    0.511
creB
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
   
  
 0.505
nasF
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components
  
 
 0.493
XCC0774
ABC transporter substrate binding protein; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
  
 
 0.493
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (11%) [HD]