STRINGSTRING
XCC1685 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1685" - MFS transporter in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1685MFS transporter; Permeases of the major facilitator superfamily (468 aa)    
Predicted Functional Partners:
benE
Benzoate transporter; Uncharacterized protein involved in benzoate metabolism (394 aa)
           
  0.701
XCC4171
Predicted membrane protein (766 aa)
           
  0.700
XCC4168
annotation not available (89 aa)
           
  0.700
pobA
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (394 aa)
 
 
   
  0.607
oprN5
Outer membrane protein (504 aa)
           
  0.588
pmrB
Multidrug resistance membrane translocase; Permeases of the major facilitator superfamily (526 aa)
           
  0.586
pheC
Cyclohexadienyl dehydratase; ABC-type amino acid transport/signal transduction systems periplasmic component/domain (256 aa)
   
   
  0.524
XCC0507
Ice nucleation protein; Uncharacterized protein conserved in bacteria (1360 aa)
   
          0.414
pcaB
3-carboxy-cis,cis-muconate cycloisomerase; Adenylosuccinate lyase (505 aa)
   
     
  0.411
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]