Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Mg-protoporphyrin IX monomethyl ester oxidative cyclase; Fe-S oxidoreductase (709 aa)
Predicted Functional Partners:
Serine kinase of the HPr protein, regulates carbohydrate metabolism (347 aa)
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase and permease components (571 aa)
annotation not available (413 aa)
Uncharacterized protein (408 aa)
Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA; Belongs to the methyltransferase superfamily. RlmKL family (756 aa)
annotation not available (281 aa)
Hexosyltransferase; Incorporation of a sugar moiety into an oligosacchride repeating unit which is later on exported and polymerized to an unidentified cell surface carbohydrate (387 aa)
Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (67 aa)
annotation not available (195 aa)
Glycosyltransferase; Incorporation of a sugar moiety into an oligosacchride repeating unit which is later on exported and polymerized to an unidentified cell surface carbohydrate (374 aa)