STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1671Aminotransferase; Amination of a sugar nucleotide precusror of an unidentified cell surface carbohydrate; Belongs to the DegT/DnrJ/EryC1 family (380 aa)    
Predicted Functional Partners:
XCC1670
Uncharacterized protein; Isomerization of a sugar nucleotide precursor of an unidentified cell surface carbohydrate
   
 0.936
wzx
Lipopolysaccharide biosynthesis protein; Export of the oligosaccharide repeating units of an unidentified cell surface carbohydrate
 
  
 0.912
XCC1673
Glycosyl transferase; Unnamed protein product
 
   
 0.891
wzz
Uncharacterized protein; Determination of the chain length of oligosaccharide repeating units forming an unidentified cell surface carbohydrate
     
 0.867
XCC1674
Uncharacterized protein
       0.859
wxcM
Bifunctional acetyl transferase/isomerase; Tetrahydrodipicolinate N-succinyltransferase
   
 0.830
XCC2189
Epimerase/dehydratase protein; Predicted nucleoside-diphosphate sugar epimerases
  
 0.773
XCC1678
Biotin synthesis protein
 
 
   0.679
XCC1676
annotation not available
 
 
   0.646
XCC1677
Uncharacterized protein
       0.526
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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