STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1646Acyl-CoA dehydrogenases (332 aa)    
Predicted Functional Partners:
XCC1645
Uncharacterized proteins, LmbE homologs
    0.996
XCC1644
Uncharacterized protein; SAM-dependent methyltransferases
     0.991
XCC1643
Glycosyl transferase-related protein; Glycosyltransferases involved in cell wall biogenesis
 
    0.976
etfA
Electron transfer flavoprotein, alpha subunit
  
 
 0.606
etfB
Electron transfer flavoprotein beta subunit; Unnamed protein product
  
 
 0.577
fadB2
3-hydroxyacyl-CoA dehydrogenase
  
 
 0.554
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase
  
 
 0.554
srpA
Catalase-related peroxidase; Has an organic peroxide-dependent peroxidase activity
 
 
 0.528
yliI
Dehydrogenase; Glucose/sorbosone dehydrogenases
   
    0.511
cat2
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide
  
 
 0.462
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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