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XCC1645 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1645" - Uncharacterized proteins, LmbE homologs in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1645Uncharacterized proteins, LmbE homologs (253 aa)    
Predicted Functional Partners:
XCC1646
Acyl-CoA dehydrogenases (332 aa)
        0.996
XCC1644
Uncharacterized protein; SAM-dependent methyltransferases (198 aa)
          0.995
XCC1643
Glycosyl transferase-related protein; Glycosyltransferases involved in cell wall biogenesis (225 aa)
        0.992
ggpS
Trehalose-6-phosphate synthase (785 aa)
   
   
  0.491
dnl
ATP-dependent DNA ligase (1001 aa)
 
        0.485
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (321 aa)
         
  0.468
XCC2016
Uncharacterized protein (394 aa)
 
        0.452
XCC1647
annotation not available (205 aa)
              0.425
cat2
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (701 aa)
 
        0.422
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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