STRINGSTRING
CAP51978.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51978.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51978.1annotation not available (94 aa)    
Predicted Functional Partners:
CAP51980.1
annotation not available (1174 aa)
              0.845
CAP51979.1
annotation not available (126 aa)
              0.845
CAP51977.1
Integrase (396 aa)
 
          0.680
intS
Integrase; Belongs to the ’phage’ integrase family (645 aa)
   
          0.658
CAP51786.1
annotation not available (309 aa)
   
          0.607
CAP51767.1
annotation not available (186 aa)
   
          0.576
CAP51787.1
annotation not available (226 aa)
   
          0.556
CAP51821.1
annotation not available (121 aa)
   
          0.547
CAP51770.1
annotation not available (177 aa)
   
          0.539
CAP51806.1
annotation not available (105 aa)
   
          0.526
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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