STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51997.1Uncharacterized protein containing caspase domain (329 aa)    
Predicted Functional Partners:
CAP51996.1
annotation not available
 
     0.975
CAP51998.1
annotation not available
       0.860
CAP52470.1
annotation not available
  
     0.663
XCC1796
Putative transposase
       0.616
wxcO
Integral membrane protein
  
     0.588
XCC3310
annotation not available
  
     0.555
XCC1795
Transposase and inactivated derivatives
       0.545
XCC3409
Nisin-resistance protein; Periplasmic protease
  
     0.422
parD
Plasmid stabilization protein; Involved in plasmid partition
  
     0.417
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (6%) [HD]