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CAP52000.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52000.1" - Phage-related minor tail protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52000.1Phage-related minor tail protein (1340 aa)    
Predicted Functional Partners:
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
          0.766
XCC0572
annotation not available (384 aa)
   
          0.740
CAP50379.1
Integrase (521 aa)
   
          0.733
xcsL
Type II secretory pathway component PulL (354 aa)
   
          0.731
CAP52001.1
annotation not available (213 aa)
              0.727
XCC1430
annotation not available (874 aa)
   
          0.727
XCC0114
Transcriptional regulator; FOG- WD40 repeat (1172 aa)
   
   
  0.725
XCC1626
Uncharacterized protein (216 aa)
              0.713
xcsC
Type II secretory pathway component PulC (270 aa)
   
          0.713
XCC3161
Outer membrane receptor proteins mostly Fe transport (978 aa)
   
          0.709
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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