STRINGSTRING
CAP52002.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52002.1" - Unknown in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52002.1Unknown (132 aa)    
Predicted Functional Partners:
CAP52000.1
Phage-related minor tail protein (1340 aa)
 
          0.532
CAP52001.1
annotation not available (213 aa)
              0.527
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
         
  0.405
CAP52003.1
annotation not available (82 aa)
              0.405
XCC1626
Uncharacterized protein (216 aa)
              0.401
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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