STRINGSTRING
CAP52009.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52009.1" - Predicted transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52009.1Predicted transcriptional regulators (120 aa)    
Predicted Functional Partners:
CAP52189.1
Predicted transcriptional regulators (80 aa)
   
          0.749
CAP52008.1
annotation not available (253 aa)
              0.597
CAP52007.1
annotation not available (104 aa)
              0.483
CAP52006.1
annotation not available (111 aa)
              0.483
ameR
Transcriptional regulator (207 aa)
   
          0.409
XCC4229
annotation not available (623 aa)
   
          0.402
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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