STRINGSTRING
CAP52012.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52012.1" - Integrase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52012.1Integrase (466 aa)    
Predicted Functional Partners:
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase (762 aa)
   
   
  0.679
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
          0.656
wxcD
wxcD; Glycosyltransferase (581 aa)
   
          0.653
XCC1115
annotation not available (643 aa)
   
          0.651
XCC0456
Opacity protein and related surface antigens (279 aa)
   
          0.637
XCC3161
Outer membrane receptor proteins mostly Fe transport (978 aa)
   
     
  0.622
xcc-b100_1236
Acetyltransferases, including N-acetylases of ribosomal proteins (635 aa)
   
          0.605
hrpW
annotation not available (329 aa)
   
          0.595
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins (576 aa)
   
     
  0.592
XCC1012
Uncharacterized protein (388 aa)
   
          0.588
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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