STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutGFormylglutamate amidohydrolase; Unnamed protein product (280 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase and related amidohydrolases; Belongs to the metallo-dependent hydrolases superfamily. HutI family
 
 0.998
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
 
  
 0.978
hutH
Histidine ammonia-lyase; Unnamed protein product; Belongs to the PAL/histidase family
  
 0.976
sdeB
Atrazine chlorohydrolase; Cytosine deaminase and related metal-dependent hydrolases
 
   
 0.957
hutC
Histidine utilization repressor; Transcriptional regulators
 
   
 0.942
gltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
     
  0.800
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2
     
  0.800
glnA1
Glutamine synthetase
    
  0.800
pyrB
Aspartate carbamoyltransferase catalytic chain; Belongs to the ATCase/OTCase family
     
  0.800
XCC2365
Unnamed protein product
     
  0.800
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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