STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hisC3Aminotransferase; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (420 aa)    
Predicted Functional Partners:
hisB
Histidine biosynthesis bifunctional protein HisB; Imidazoleglycerol-phosphate dehydratase; In the N-terminal section; belongs to the histidinol- phosphatase family
 
 0.994
hisI
Histidine biosynthesis bifunctional protein HisIE; Phosphoribosyl-AMP cyclohydrolase; In the C-terminal section; belongs to the PRA-PH family
  
 0.966
tyrA
Chorismate mutase/prephenate dehydrogenase; Prephenate dehydrogenase
 
 0.966
XCC1590
P-protein; Prephenate dehydratase
  
 0.940
phhA
Phenylalanine-4-hydroxylase
     
 0.901
hpd
4-hydroxyphenylpyruvate dioxygenase and related hemolysins
    
  0.901
pheC
Cyclohexadienyl dehydratase; ABC-type amino acid transport/signal transduction systems periplasmic component/domain
   
 
  0.900
dadA1
Glycine/D-amino acid oxidases (deaminating)
     
  0.900
cat1
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily
     
  0.900
dadA2
D-amino acid dehydrogenase; Oxidative deamination of D-amino acids
     
  0.900
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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