STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1566Uncharacterized protein; Predicted hydrolase of the alpha/beta superfamily (317 aa)    
Predicted Functional Partners:
pilY
Tfp pilus assembly protein, tip-associated adhesin PilY1
      
 0.704
XCC0251
annotation not available
 
    0.496
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning; Belongs to the SMC family
       0.485
fpvA1
Outer membrane receptor for monomeric catechols
 
    0.481
entF
ATP-dependent serine activating enzyme; Non-ribosomal peptide synthetase modules and related proteins
 
    0.479
XCC3596
Uncharacterized iron-regulated membrane protein
 
    0.464
fhuE
Outer membrane receptor proteins, mostly Fe transport
 
    0.452
XCC0252
annotation not available
 
     0.417
XCC0139
Uncharacterized iron-regulated membrane protein
 
    0.410
feoB
Fe2+ transport system protein B
   
  
 0.407
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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