STRINGSTRING
XCC1559 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1559" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1559annotation not available (101 aa)    
Predicted Functional Partners:
XCC1558
Uncharacterized protein (111 aa)
 
          0.975
paiB
Transcriptional regulator (212 aa)
              0.898
asnS
Asparagine--tRNA ligase; Aspartyl/asparaginyl-tRNA synthetases (464 aa)
              0.898
XCC1560
annotation not available (84 aa)
              0.845
XCC3757
annotation not available (246 aa)
   
          0.784
ecnA
Entericidin A; Directs the synthesis one of of two small cell-envelope lipoproteins which can maintain plasmids in bacterial population (50 aa)
   
          0.783
ecnB
Exported putative entericidin B; Directs the synthesis one of of two small cell-envelope lipoproteins which can maintain plasmids in bacterial population (44 aa)
   
          0.783
XCC1410
annotation not available (280 aa)
   
          0.782
XCC3484
annotation not available (239 aa)
   
          0.782
XCC3311
annotation not available (168 aa)
   
          0.781
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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