STRINGSTRING
XCC1520 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1520" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1520annotation not available (632 aa)    
Predicted Functional Partners:
CAP52102.1
FOG- GGDEF domain (376 aa)
          0.978
XCC3871
Mn2+-dependent serine/threonine protein kinase (219 aa)
   
          0.713
XCC0240
annotation not available (886 aa)
   
          0.540
XCC0047
annotation not available (283 aa)
   
          0.489
XCC1496
annotation not available (177 aa)
   
          0.460
XCC0431
Nuclease; Predicted extracellular nuclease (1193 aa)
   
          0.451
XCC0439
annotation not available (221 aa)
   
          0.447
XCC1519
23S rRNA (guanosine-2’-O-)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA (249 aa)
              0.434
XCC0120
Outer membrane receptor proteins, mostly Fe transport (1066 aa)
   
          0.431
mdoB
Phosphoglycerol transferase I; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family (702 aa)
   
          0.421
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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