STRINGSTRING
CAP52118.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52118.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52118.1annotation not available (36 aa)    
Predicted Functional Partners:
XCC2843
Uncharacterized protein (83 aa)
   
          0.784
XCC3383
annotation not available (114 aa)
   
          0.781
XCC1424
annotation not available (142 aa)
   
          0.777
rnz
Uncharacterized protein; Metal-dependent hydrolases of the beta-lactamase superfamily III (250 aa)
   
          0.776
argD
L-lysine 6-aminotransferase; Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (498 aa)
   
          0.769
CAP52117.1
annotation not available (36 aa)
 
       
0.762
fadE3
Acyl-CoA dehydrogenases (382 aa)
           
0.757
XCC0201
annotation not available (140 aa)
   
          0.755
XCC0163
Ca2+-binding protein (EF-Hand superfamily) (117 aa)
   
          0.719
uptF
annotation not available (72 aa)
   
          0.718
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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