STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gluP2Glucose/galactose transporter; Fucose permease (436 aa)    
Predicted Functional Partners:
age
Uncharacterized protein; N-acyl-D-glucosamine 2-epimerase
 
     0.897
scrK
Fructokinase; Sugar kinases, ribokinase family
     
 0.889
XCC1507
Transcriptional regulators
 
   
 0.864
XCC4070
L-fucose mutarotase; Plays a role in the catabolism of L-fucose. Involved in the anomeric conversion of L-fucose; Belongs to the RbsD / FucU family. FucU mutarotase subfamily
 
    0.843
garD
Altronate dehydratase
  
  
 0.814
fabG1
Pteridine reductase 1; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  
  
 0.628
glk1
Glucokinase; Belongs to the bacterial glucokinase family
 
   
 0.617
nasA
Nitrate/nitrite transporter
     
 0.529
XCC1506
Uncharacterized protein
       0.507
ttuB
MFS transporter; Permeases of the major facilitator superfamily
  
  
 0.489
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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