STRINGSTRING
XCC1505 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1505" - Uncharacterized protein conserved in bacteria in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1505Uncharacterized protein conserved in bacteria (231 aa)    
Predicted Functional Partners:
slyX
Protein SlyX homolog; Belongs to the SlyX family (78 aa)
 
          0.932
ugd
Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (448 aa)
              0.898
fkpA1
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (297 aa)
              0.792
XCC1498
annotation not available (328 aa)
 
          0.743
XCC0201
annotation not available (140 aa)
   
          0.717
XCC3453
UPF0250 protein XCC3453; Belongs to the UPF0250 family (130 aa)
   
          0.703
XCC2431
annotation not available (159 aa)
   
          0.666
XCC2390
annotation not available (161 aa)
   
          0.661
XCC2504
Uncharacterized protein (89 aa)
   
          0.652
uptF
annotation not available (72 aa)
   
          0.650
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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