STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1505Uncharacterized protein conserved in bacteria (231 aa)    
Predicted Functional Partners:
slyX
Protein SlyX homolog; Belongs to the SlyX family
 
     0.932
ugd
Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family
       0.898
fkpA1
FKBP-type peptidyl-prolyl cis-trans isomerases 1
       0.792
XCC1498
annotation not available
 
     0.743
XCC0201
annotation not available
  
     0.717
XCC3453
UPF0250 protein XCC3453; Belongs to the UPF0250 family
  
     0.703
XCC2431
annotation not available
  
     0.666
XCC2390
annotation not available
  
     0.661
XCC2504
Uncharacterized protein
  
     0.652
uptF
annotation not available
  
     0.650
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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