STRINGSTRING
slyX protein (Xanthomonas campestris campestris) - STRING interaction network
"slyX" - Protein SlyX homolog in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyXProtein SlyX homolog; Belongs to the SlyX family (78 aa)    
Predicted Functional Partners:
XCC1505
Uncharacterized protein conserved in bacteria (231 aa)
 
          0.932
ugd
Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (448 aa)
              0.898
fkpA1
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (297 aa)
         
  0.795
XCC1501
Glutathione peroxidase; Unnamed protein product; Belongs to the glutathione peroxidase family (185 aa)
              0.648
XCC1498
annotation not available (328 aa)
 
          0.556
nodI
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase component (291 aa)
 
          0.501
XCC2656
annotation not available (60 aa)
   
          0.474
XCC0193
annotation not available (300 aa)
   
          0.470
XCC3763
annotation not available (179 aa)
   
          0.460
XCC0936
annotation not available (215 aa)
   
          0.441
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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