STRINGSTRING
XCC1496 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1496" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1496annotation not available (177 aa)    
Predicted Functional Partners:
XCC1497
annotation not available (274 aa)
 
          0.846
XCC1498
annotation not available (328 aa)
 
          0.788
nodI
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase component (291 aa)
              0.761
XCC1500
Predicted transcriptional regulators (120 aa)
              0.761
XCC3075
annotation not available (388 aa)
   
          0.753
CAP52133.1
annotation not available (82 aa)
              0.746
XCC2722
Outer membrane phospholipase A (398 aa)
   
          0.710
CAP51862.1
Signal transduction kinase (515 aa)
   
          0.703
XCC2560
annotation not available (278 aa)
   
          0.686
XCC0047
annotation not available (283 aa)
   
          0.686
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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