STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1488annotation not available (303 aa)    
Predicted Functional Partners:
XCC1489
Uncharacterized protein
  
    0.899
sucA
2-oxoglutarate dehydrogenase complex,dehydrogenase (E1) component, and related enzymes
       0.737
XCC1424
annotation not available
  
     0.710
XCC0557
annotation not available
 
     0.700
XCC3484
annotation not available
 
     0.686
XCC0845
annotation not available
  
     0.682
XCC0201
annotation not available
  
     0.681
XCC3758
annotation not available
  
     0.670
XCC0163
Ca2+-binding protein (EF-Hand superfamily)
  
     0.664
XCC3383
annotation not available
  
     0.648
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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