STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1481Hydrogen peroxide-inducible genes activator protein; Transcriptional regulator (299 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase subunit C; Peroxiredoxin
     
 0.907
cat1
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily
     
 0.899
XCC2579
Reductase; Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzymes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
      
 0.804
ahpF
Alkyl hydroperoxide reductase large subunit
     
 0.770
XCC1437
Transcriptional regulator
  
  
 0.756
ohr
Organic hydroperoxide resistance protein; Predicted redox protein regulator of disulfide bond formation
      
 0.727
soxR
Predicted transcriptional regulators
    
 
 0.705
oprN3
Outer membrane component of multidrug efflux pump; Outer membrane protein
 
     0.688
XCC1479
Membrane-fusion protein
 
 
   0.660
XCC1480
Toxin secretion ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components
 
     0.640
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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