STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1480Toxin secretion ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components (563 aa)    
Predicted Functional Partners:
XCC1479
Membrane-fusion protein
 
  
 0.980
oprN3
Outer membrane component of multidrug efflux pump; Outer membrane protein
 
  
 0.980
xcsN
annotation not available
  
     0.715
XCC1481
Hydrogen peroxide-inducible genes activator protein; Transcriptional regulator
 
     0.640
XCC0684
Serine protease; Function unknown
 
     0.583
XCC2666
Subtilisin-like serine proteases
 
  
 0.512
celS1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family
  
     0.500
XCC0456
Opacity protein and related surface antigens
  
   
 0.495
XCC3069
Uncharacterized protein
     
 0.493
XCC0320
annotation not available
  
    0.480
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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