STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprN3Outer membrane component of multidrug efflux pump; Outer membrane protein (467 aa)    
Predicted Functional Partners:
XCC1479
Membrane-fusion protein
 
 
 0.983
XCC1480
Toxin secretion ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components
 
  
 0.980
XCC0456
Opacity protein and related surface antigens
  
   
 0.701
XCC1481
Hydrogen peroxide-inducible genes activator protein; Transcriptional regulator
 
     0.688
XCC1350
annotation not available
  
     0.664
xcsN
annotation not available
  
     0.658
XCC0320
annotation not available
  
     0.585
XCC1750
Outer membrane receptor for monomeric catechols
  
   
 0.540
XCC3715
annotation not available
  
   
 0.525
XCC0566
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, permease component
  
 
 0.515
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (8%) [HD]