STRINGSTRING
XCC1459 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1459" - Integrase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1459Integrase (510 aa)    
Predicted Functional Partners:
CAP52181.1
annotation not available (627 aa)
 
          0.953
XCC3461
Uncharacterized protein; ATPases of the AAA+ class (982 aa)
   
          0.739
CAP51045.1
annotation not available (275 aa)
   
          0.721
mobL3
Plasmid mobilization protein; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member (541 aa)
   
          0.718
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase (762 aa)
   
   
  0.708
CAP52472.1
Type V secretory pathway, adhesin AidA (1331 aa)
   
          0.648
CAP52000.1
Phage-related minor tail protein (1340 aa)
   
          0.644
XCC1012
Uncharacterized protein (388 aa)
   
          0.640
CAP52182.1
annotation not available (322 aa)
              0.625
repA
Uncharacterized protein conserved in bacteria (1187 aa)
 
   
  0.612
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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