STRINGSTRING
CAP52181.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52181.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52181.1annotation not available (627 aa)    
Predicted Functional Partners:
XCC1459
Integrase (510 aa)
 
          0.953
CAP51045.1
annotation not available (275 aa)
   
          0.767
XCC3461
Uncharacterized protein; ATPases of the AAA+ class (982 aa)
   
          0.733
mobL3
Plasmid mobilization protein; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member (541 aa)
   
          0.725
XCC2903
annotation not available (284 aa)
   
          0.692
XCC1012
Uncharacterized protein (388 aa)
   
          0.687
XCC2106
annotation not available (44 aa)
   
          0.664
CAP52182.1
annotation not available (322 aa)
              0.657
XCC1247
annotation not available (668 aa)
   
          0.644
XCC2108
Uncharacterized protein; Transcriptional regulator (228 aa)
   
          0.614
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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