STRINGSTRING
CAP52189.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52189.1" - Predicted transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52189.1Predicted transcriptional regulators (80 aa)    
Predicted Functional Partners:
CAP52009.1
Predicted transcriptional regulators (120 aa)
   
          0.749
CAP52487.1
Predicted transcription factor, homolog of eukaryotic MBF1 (128 aa)
   
          0.746
CAP51045.1
annotation not available (275 aa)
   
        0.619
virB6_2
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.600
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.587
CAP52188.1
N-acetylmuramoyl-L-alanine amidase (528 aa)
 
          0.575
CAP52181.1
annotation not available (627 aa)
   
          0.541
XCC1543
Uncharacterized protein; Cyclopropane fatty acid synthase and related methyltransferases (319 aa)
   
          0.516
XCC3783
annotation not available (186 aa)
   
          0.505
CAP52190.1
annotation not available (103 aa)
              0.498
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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