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mexF protein (Xanthomonas campestris campestris) - STRING interaction network
"mexF" - Cation/multidrug efflux pump in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mexFCation/multidrug efflux pump (1075 aa)    
Predicted Functional Partners:
XCC1439
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (396 aa)
 
  0.969
oprN4
Outer membrane protein (474 aa)
 
  0.944
mexA
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (399 aa)
 
  0.896
acrA2
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (436 aa)
 
  0.877
mtrC
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (412 aa)
 
  0.782
oprN2
Outer membrane protein (497 aa)
 
  0.775
raxC
Outer membrane protein (457 aa)
   
 
  0.772
XCC1441
Short chain dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family (243 aa)
              0.738
dauE
Aklaviketone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (257 aa)
              0.688
toxG
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (361 aa)
 
  0.683
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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