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dauE protein (Xanthomonas campestris campestris) - STRING interaction network
"dauE" - Aklaviketone reductase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dauEAklaviketone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (257 aa)    
Predicted Functional Partners:
XCC1439
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (396 aa)
 
          0.886
XCC1441
Short chain dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family (243 aa)
 
          0.776
XCC2202
Uncharacterized protein; Exonuclease III (315 aa)
   
        0.718
XCC1437
Transcriptional regulator (344 aa)
 
          0.700
mexF
Cation/multidrug efflux pump (1075 aa)
              0.688
CAP51862.1
Signal transduction kinase (515 aa)
   
          0.661
oprN4
Outer membrane protein (474 aa)
 
          0.658
XCC0300
annotation not available (225 aa)
   
      0.641
XCC1496
annotation not available (177 aa)
   
          0.633
XCC2651
annotation not available (401 aa)
   
          0.628
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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