STRINGSTRING
XCC1430 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1430" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1430annotation not available (874 aa)    
Predicted Functional Partners:
gcdH
Acyl-CoA dehydrogenases (387 aa)
              0.832
XCC0572
annotation not available (384 aa)
   
          0.768
XCC0114
Transcriptional regulator; FOG- WD40 repeat (1172 aa)
 
          0.751
XCC3161
Outer membrane receptor proteins mostly Fe transport (978 aa)
   
          0.746
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
          0.745
CAP52000.1
Phage-related minor tail protein (1340 aa)
   
          0.727
CAP52472.1
Type V secretory pathway, adhesin AidA (1331 aa)
   
          0.713
XCC2602
annotation not available (393 aa)
   
          0.710
XCC2562
Uncharacterized membrane protein (homolog of Drosophila rhomboid) (487 aa)
 
          0.683
xcsL
Type II secretory pathway component PulL (354 aa)
   
          0.683
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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