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XCC1428 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1428" - Predicted outer membrane lipoprotein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1428Predicted outer membrane lipoprotein (258 aa)    
Predicted Functional Partners:
XCC1427
annotation not available (71 aa)
 
          0.778
XCC1426
Uncharacterized protein; Mg-dependent DNase (255 aa)
 
          0.749
XCC3256
annotation not available (114 aa)
   
          0.594
XCC2431
annotation not available (159 aa)
   
          0.583
XCC3967
Periplasmic protein TonB, links inner and outer membranes (335 aa)
   
          0.561
XCC2792
annotation not available (274 aa)
   
          0.547
XCC2250
annotation not available (196 aa)
   
          0.537
XCC4211
Predicted NTP binding protein (contains STAS domain) (97 aa)
   
        0.527
XCC1742
annotation not available (172 aa)
   
          0.525
XCC3862
Cell division protein (286 aa)
   
          0.521
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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