STRINGSTRING
XCC1401 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1401" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1401annotation not available (300 aa)    
Predicted Functional Partners:
XCC3313
annotation not available (160 aa)
   
          0.735
XCC1682
Serine kinase of the HPr protein, regulates carbohydrate metabolism (347 aa)
   
          0.726
XCC1041
Outer membrane receptor proteins, mostly Fe transport (1034 aa)
   
          0.708
XCC1583
annotation not available (332 aa)
   
          0.688
XCC1497
annotation not available (274 aa)
   
          0.684
XCC3209
Outer membrane receptor proteins mostly Fe transport (926 aa)
   
          0.682
XCC1169
annotation not available (774 aa)
   
          0.677
XCC1684
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase and permease components (571 aa)
   
          0.658
XCC1668
annotation not available (448 aa)
   
          0.645
XCC1829
annotation not available (133 aa)
   
          0.642
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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