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pmrB protein (Xanthomonas campestris campestris) - STRING interaction network
"pmrB" - Multidrug resistance membrane translocase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmrBMultidrug resistance membrane translocase; Permeases of the major facilitator superfamily (526 aa)    
Predicted Functional Partners:
pmrA
Multidrug resistance efflux pump; Membrane-fusion protein (397 aa)
 
 
  0.992
oprN5
Outer membrane protein (504 aa)
 
 
  0.963
yybA
Transcriptional regulators (147 aa)
     
      0.847
rmrA
Membrane-fusion protein (413 aa)
 
 
  0.808
XCC1411
Transcriptional regulators (166 aa)
 
 
  0.706
XCC1396
Transcriptional regulator; AraC-type DNA-binding domain-containing proteins (329 aa)
         
  0.640
XCC3489
Multidrug resistance efflux pump (363 aa)
 
 
  0.623
benE
Benzoate transporter; Uncharacterized protein involved in benzoate metabolism (394 aa)
           
  0.591
pcaK
MFS transporter; Permeases of the major facilitator superfamily (436 aa)
     
   
  0.589
XCC1685
MFS transporter; Permeases of the major facilitator superfamily (468 aa)
           
  0.586
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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