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XCC1396 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1396" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1396Transcriptional regulator; AraC-type DNA-binding domain-containing proteins (329 aa)    
Predicted Functional Partners:
parC
DNA topoisomerase 4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily (747 aa)
     
 
  0.714
Ada
DNA methylation and regulatory protein Ada or; 3-methyladenine DNA glycosylase (521 aa)
 
 
 
  0.698
XCC4076
Two-component system sensor protein; Na+/proline symporter (1147 aa)
     
 
  0.669
yybA
Transcriptional regulators (147 aa)
         
  0.665
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (321 aa)
         
  0.660
XCC2741
Bifunctional diaminopimelate decarboxylase/aspartate kinase; Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family (896 aa)
         
  0.655
pmrA
Multidrug resistance efflux pump; Membrane-fusion protein (397 aa)
         
  0.651
pmrB
Multidrug resistance membrane translocase; Permeases of the major facilitator superfamily (526 aa)
         
  0.640
oprN5
Outer membrane protein (504 aa)
         
  0.640
thrA
Bifunctional aspartokinase/homoserine dehydrogenase I; Aspartokinases (835 aa)
         
  0.573
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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